Data and Software


FsePSA
A program to compute pairwise alignments between coding DNA sequences while accounting for the length of frameshift translations.

ProCARs
A program to reconstruct Ancestral gene orders as CARs (Contiguous Ancestral Regions) with a progressive homology-based method.

Protein2GeneTree
A program to compute a genetree minimizing the sum of reconciliation costs with a protein tree and a species tree.